Transform a DMR with the Nifti Converter
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- Category: Coregistration
- Last Updated: 16 April 2018
- Published: 16 April 2018
- Hits: 3050
It might happen that a DMR has an incorrect orientation. We can set the right orientation with the use of the Nifti-Converter. The procedure is as follows:
1 Load a DMR and start Plugins > Nifti Converter
2 select Global options: transformation
3 set the transformation matrix
4 set “apply to DMR”
5 click “Start Processing”
We will now go through each step. Open a DMR and start the Nifti Converter.
Set Global Options
In this tab, choose "Perform transformation function"
Next, go to the tab "Transformation functions".
Transformation matrix for flip in X-direction (Left-Right)
Fill the matrix according to the image below and choose the options on the left. Once filled, you can click "Start Processing".
Transformation matrix for flip in Y-direction (Anterior-Posterior)
Fill the matrix according to the image below and choose the options on the left. Once filled, you can click "Start Processing".
Transformation matrix for flip in Z-direction (Inferior-Superior)
Fill the matrix according to the image below and choose the options on the left. Once filled, you can click "Start Processing".